STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
megf10Multiple EGF-like-domains 10. (1055 aa)    
Predicted Functional Partners:
LOC102196666
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.659
LAMA2
Laminin subunit alpha 2.
    
 
0.655
LOC102208611
Interleukin-1.
    
 0.645
ENSPNYP00000030986
Uncharacterized protein.
    
 0.641
tnfrsf13b
TACI-CRD2 domain-containing protein.
    
 0.635
gulp1
GULP PTB domain containing engulfment adaptor 1a.
   
 
 0.630
LOC102215719
Uncharacterized protein.
    
  0.624
LOC102197088
Uncharacterized protein.
    
  0.624
itgb4
Integrin beta.
   
 0.591
ENSPNYP00000002243
Uncharacterized protein.
   
 0.579
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.