STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102209932SERPIN domain-containing protein; Belongs to the serpin family. (114 aa)    
Predicted Functional Partners:
LOC102207201
Uncharacterized protein; Belongs to the peptidase S1 family.
  
 0.995
LOC102200345
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
  
 0.995
fgb
Fibrinogen beta chain.
   
 0.954
HGFAC
HGF activator.
  
 0.922
fgg
Fibrinogen gamma chain.
   
 0.911
ENSPNYP00000007349
Uncharacterized protein.
   
 0.909
ENSPNYP00000007375
Fibrinogen C-terminal domain-containing protein.
   
 0.909
ENSPNYP00000022655
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 0.870
APOH
Apolipoprotein H.
   
 0.827
APOH-2
Apolipoprotein H.
   
 0.827
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.