STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmbsHydroxymethylbilane synthase a. (442 aa)    
Predicted Functional Partners:
uros
Uroporphyrinogen III synthase.
  
 0.997
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 0.996
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 0.986
ENSPNYP00000003933
Uncharacterized protein.
  
 0.971
ENSPNYP00000003961
Uncharacterized protein.
  
 0.971
dhfr
Dihydrofolate reductase.
    
 0.834
LOC102211685
Zgc:153031.
    
 0.834
spata20
Spermatogenesis associated 20.
    
  0.826
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.787
dtymk
Deoxythymidylate kinase (thymidylate kinase).
    
 0.744
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.