STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102204104C-type lectin domain-containing protein. (119 aa)    
Predicted Functional Partners:
LOC102193789
Zmp:0000000846.
    
  0.495
ENSPNYP00000009216
Fibronectin type-III domain-containing protein.
    
  0.495
tnn
Tenascin N.
    
  0.495
tnr
Tenascin R (restrictin, janusin).
    
  0.495
tnc
Tenascin C.
    
  0.495
ENSPNYP00000030829
Uncharacterized protein.
    
  0.495
HGFAC
HGF activator.
    
  0.447
habp2
Uncharacterized protein.
    
  0.447
ENSPNYP00000014913
C-type lectin domain-containing protein.
  
     0.408
ENSPNYP00000017694
Uncharacterized protein.
    
  0.401
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.