STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF72_01740Putative NAD(P)H dehydrogenase (Quinone). (182 aa)    
Predicted Functional Partners:
JF72_00710
Fumarate reductase flavoprotein subunit.
   
 0.976
JF72_01730
NADPH-dependent FMN reductase.
 
  
 
0.951
JF72_12610
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
   
  0.939
frdA
Fumarate reductase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.900
JF72_09580
FAD binding domain protein.
   
  0.899
JF72_07930
Riboflavin kinase; Belongs to the ribF family.
    
 0.894
JF72_02410
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
    
 0.890
apbE
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.637
JF72_01750
Protein-tyrosine phosphatase.
       0.547
JF72_08960
Rhodanese family protein.
    
 0.492
Your Current Organism:
Lactobacillus apis
NCBI taxonomy Id: 303541
Other names: CCM 8403, L. apis, LMG 26964, LMG:26964, Lactobacillus apis Killer et al. 2014, Lactobacillus sp. ESL0185, Lactobacillus sp. R4B, Lactobacillus sp. R4C, strain R4B
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