STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF72_05170Response regulator. (245 aa)    
Predicted Functional Partners:
JF72_05180
Sensor protein.
 0.997
JF72_09100
Two-component sensor histidine kinase.
 0.982
JF72_00830
Sensor protein.
 0.972
JF72_01910
Sensor histidine kinase.
 0.965
JF72_06400
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.837
JF72_05160
Integral membrane protein.
     
 0.783
JF72_05150
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
    0.698
JF72_05280
Transcriptional regulator-type.
    
 0.636
JF72_08530
Serine/threonine protein kinase.
     
 0.576
JF72_00860
Metallo-beta-lactamase superfamily protein.
  
  
 0.539
Your Current Organism:
Lactobacillus apis
NCBI taxonomy Id: 303541
Other names: CCM 8403, L. apis, LMG 26964, LMG:26964, Lactobacillus apis Killer et al. 2014, Lactobacillus sp. ESL0185, Lactobacillus sp. R4B, Lactobacillus sp. R4C, strain R4B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.