STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF72_07620ABC transporter permease. (233 aa)    
Predicted Functional Partners:
metN
ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
JF72_07640
Lipoprotein; Belongs to the nlpA lipoprotein family.
 0.999
JF72_01880
Putative osmoprotectant ABC transporter permease/substrate-binding protein.
   
 
  0.476
JF72_05010
ABC transport system ATP-binding protein.
   
  0.464
JF72_01700
ABC superfamily ATP binding cassette transporter, binding protein.
   
  0.449
JF72_14080
ABC superfamily ATP binding cassette transporter, ABC protein.
    
 0.437
JF72_01450
ABC transporter ATP-binding protein.
   
  0.436
JF72_10750
ABC transporter, ATP-binding protein.
   
  0.425
JF72_00250
ABC transporter, ATP-binding protein.
    
  0.424
JF72_04640
ABC superfamily ATP binding cassette transporter ABC protein.
   
  0.424
Your Current Organism:
Lactobacillus apis
NCBI taxonomy Id: 303541
Other names: CCM 8403, L. apis, LMG 26964, LMG:26964, Lactobacillus apis Killer et al. 2014, Lactobacillus sp. ESL0185, Lactobacillus sp. R4B, Lactobacillus sp. R4C, strain R4B
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