STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdCPutative Fumarate reductase. (480 aa)    
Predicted Functional Partners:
frdA
Fumarate reductase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
  
 
0.947
JF72_00710
Fumarate reductase flavoprotein subunit.
 
  
 
0.811
JF72_00430
Flavoprotein.
 
  
 
0.651
JF72_13530
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
     0.624
JF72_02190
FAD binding domain protein.
 
  
 
0.537
JF72_13560
FAD binding domain protein.
 
  
 
0.533
JF72_12610
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
  
 
0.520
JF72_09580
FAD binding domain protein.
 
  
 
0.514
JF72_08080
FAD binding domain protein.
 
  
 
0.406
Your Current Organism:
Lactobacillus apis
NCBI taxonomy Id: 303541
Other names: CCM 8403, L. apis, LMG 26964, LMG:26964, Lactobacillus apis Killer et al. 2014, Lactobacillus sp. ESL0185, Lactobacillus sp. R4B, Lactobacillus sp. R4C, strain R4B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.