Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C662_00965 | C662_00995 | C662_00965 | C662_00995 | Hypothetical protein. | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | 0.677 |
C662_00965 | C662_01000 | C662_00965 | C662_01000 | Hypothetical protein. | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | 0.719 |
C662_00965 | C662_01005 | C662_00965 | C662_01005 | Hypothetical protein. | Colicin V production protein. | 0.713 |
C662_00965 | accD | C662_00965 | C662_00990 | Hypothetical protein. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit b; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.682 |
C662_00965 | purF | C662_00965 | C662_01010 | Hypothetical protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.658 |
C662_00965 | trpA | C662_00965 | C662_00985 | Hypothetical protein. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.699 |
C662_00965 | trpB | C662_00965 | C662_00980 | Hypothetical protein. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.813 |
C662_00965 | truA | C662_00965 | C662_00970 | Hypothetical protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.945 |
C662_00995 | C662_00965 | C662_00995 | C662_00965 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Hypothetical protein. | 0.677 |
C662_00995 | C662_01000 | C662_00995 | C662_01000 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | 0.921 |
C662_00995 | C662_01005 | C662_00995 | C662_01005 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Colicin V production protein. | 0.818 |
C662_00995 | accD | C662_00995 | C662_00990 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit b; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.902 |
C662_00995 | purF | C662_00995 | C662_01010 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.881 |
C662_00995 | trpA | C662_00995 | C662_00985 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.867 |
C662_00995 | trpB | C662_00995 | C662_00980 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.768 |
C662_00995 | truA | C662_00995 | C662_00970 | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.857 |
C662_01000 | C662_00965 | C662_01000 | C662_00965 | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.719 |
C662_01000 | C662_00995 | C662_01000 | C662_00995 | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | FolC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | 0.921 |
C662_01000 | C662_01005 | C662_01000 | C662_01005 | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | Colicin V production protein. | 0.858 |
C662_01000 | C662_04353 | C662_01000 | C662_04353 | Sporulation domain-containing protein; COG3147 Uncharacterized protein conserved in bacteria. | COG2891 Cell shape-determining protein. | 0.691 |
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