Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C662_02065Hypothetical protein. (48 aa)    
Predicted Functional Partners:
C662_02070
FixH family protein; COG3198 Uncharacterized protein conserved in bacteria.
       0.732
C662_02075
Cytochrome C oxidase accessory protein CcoG; COG0348 Polyferredoxin.
       0.714
C662_02085
COG4736 Cbb3-type cytochrome oxidase, subunit 3.
       0.496
C662_02080
Cytochrome C oxidase cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
       0.487
C662_02090
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
       0.479
C662_02095
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
       0.458
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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