Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C662_03473ABC transporter; COG0661 Predicted unusual protein kinase. (446 aa)    
Predicted Functional Partners:
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.801
C662_03468
Hypothetical protein.
 
     0.692
C662_03458
COG0415 Deoxyribodipyrimidine photolyase.
 
     0.659
C662_14761
O-antigen polymerase.
  
 
 0.657
ubiG
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 
 0.645
C662_08395
Cyclase/dehydrase; COG2867 Oligoketide cyclase/lipid transport protein.
  
 
 
 0.624
C662_15461
Ubiquinone biosynthesis hydroxylase family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 0.609
C662_18638
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 0.608
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
     
  0.602
C662_02210
COG0480 Translation elongation factors (GTPases).
     
 0.567
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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