STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_03898Regulatory protein LuxR; COG2771 DNA-binding HTH domain-containing proteins. (408 aa)    
Predicted Functional Partners:
C662_03878
CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
     0.835
C662_03888
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.828
C662_03883
CoA-transferase subunit alpha; COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
     0.824
C662_03828
Hypothetical protein.
 
     0.817
C662_03853
COG1960 Acyl-CoA dehydrogenases.
 
     0.799
C662_08864
Hypothetical protein.
  
 
 0.799
C662_03833
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.784
C662_03868
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
 
     0.751
C662_03588
COG1960 Acyl-CoA dehydrogenases.
  
     0.744
C662_08699
Putative sensor-regulator protein; COG0642 Signal transduction histidine kinase.
     
 0.744
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.