Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C662_03613 | C662_03913 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.955 |
C662_03613 | C662_04103 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1960 Acyl-CoA dehydrogenases. | 0.895 |
C662_03613 | C662_04108 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1960 Acyl-CoA dehydrogenases. | 0.881 |
C662_03613 | C662_04113 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase. | 0.984 |
C662_03613 | C662_04118 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Hypothetical protein. | 0.705 |
C662_03613 | C662_04123 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1960 Acyl-CoA dehydrogenases. | 0.881 |
C662_03613 | C662_04128 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Putative nucleic-acid-binding protein; COG2030 Acyl dehydratase. | 0.642 |
C662_03613 | C662_05000 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | NAD-binding 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.888 |
C662_03613 | C662_05010 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.855 |
C662_03613 | C662_14481 | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit. | 0.962 |
C662_03913 | C662_03613 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.955 |
C662_03913 | C662_04103 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | COG1960 Acyl-CoA dehydrogenases. | 0.866 |
C662_03913 | C662_04108 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | COG1960 Acyl-CoA dehydrogenases. | 0.787 |
C662_03913 | C662_04113 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase. | 0.992 |
C662_03913 | C662_04118 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Hypothetical protein. | 0.779 |
C662_03913 | C662_04123 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | COG1960 Acyl-CoA dehydrogenases. | 0.732 |
C662_03913 | C662_04128 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Putative nucleic-acid-binding protein; COG2030 Acyl dehydratase. | 0.643 |
C662_03913 | C662_05000 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | NAD-binding 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.955 |
C662_03913 | C662_05010 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.955 |
C662_03913 | C662_14481 | Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. | COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit. | 0.950 |
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