STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_04113Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase. (392 aa)    
Predicted Functional Partners:
C662_03913
Acyl dehydratase; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
 0.992
C662_04128
Putative nucleic-acid-binding protein; COG2030 Acyl dehydratase.
 0.988
C662_03613
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.984
C662_05000
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.984
C662_05010
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.984
C662_04118
Hypothetical protein.
 
 0.961
C662_04108
COG1960 Acyl-CoA dehydrogenases.
 
  0.956
C662_14481
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 
 0.939
C662_04123
COG1960 Acyl-CoA dehydrogenases.
 
  0.922
C662_04103
COG1960 Acyl-CoA dehydrogenases.
 
  0.906
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
Server load: low (16%) [HD]