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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_04875Sulfate transporter/antisigma-factor antagonist STAS. (389 aa)    
Predicted Functional Partners:
C662_10471
Toluene tolerance family protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.791
C662_04398
Hypothetical protein.
  
     0.771
C662_00525
Hypothetical protein.
  
     0.770
C662_15211
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.769
C662_14021
CheW protein; COG0835 Chemotaxis signal transduction protein.
 
     0.761
C662_08889
Hypothetical protein; COG1639 Predicted signal transduction protein.
  
     0.754
C662_14011
Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
     0.740
C662_14246
COG3081 Nucleoid-associated protein.
  
     0.734
C662_11583
Hypothetical protein.
  
     0.727
C662_15391
Hypothetical protein.
  
     0.725
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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