STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_07119Inner membrane protein 1; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (322 aa)    
Predicted Functional Partners:
C662_07114
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.729
C662_17238
Lipoprotein; COG4259 Uncharacterized protein conserved in bacteria.
  
     0.496
C662_17233
COG4380 Uncharacterized protein conserved in bacteria.
  
     0.495
C662_17243
Putative lipoprotein; COG1462 Uncharacterized protein involved in formation of curli polymers.
  
     0.485
C662_17003
COG0625 Glutathione S-transferase.
  
  
  0.408
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.