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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_08090Extradiol ring-cleavage dioxygenase III subunit B. (273 aa)    
Predicted Functional Partners:
C662_08095
COG3038 Cytochrome B561.
  
  
 0.836
C662_04258
TesA protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.811
C662_16853
Flavin reductase domain-containing FMN-binding protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.811
C662_08100
Hypothetical protein; Belongs to the UPF0312 family.
     
 0.800
C662_03583
FAD-binding oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.767
C662_12147
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.767
C662_17523
Pirin; COG1741 Pirin-related protein; Belongs to the pirin family.
 
  
 0.706
C662_07144
Pirin; COG1741 Pirin-related protein; Belongs to the pirin family.
 
  
 0.684
C662_08105
Hypothetical protein; Belongs to the UPF0312 family.
 
   
 0.634
C662_05485
Methylitaconate delta2-delta3-isomerase; COG2828 Uncharacterized protein conserved in bacteria.
    
 0.597
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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