STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_09940Pyridine nucleotide-disulfide oxidoreductase family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (375 aa)    
Predicted Functional Partners:
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
   
  0.939
C662_09950
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.872
C662_09945
COG3222 Uncharacterized protein conserved in bacteria.
 
    0.853
C662_09960
Hypothetical protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.826
C662_00300
Formate dehydrogenase subunit beta; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
 0.818
C662_11468
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
 0.818
C662_09955
Hypothetical protein.
 
     0.810
C662_11448
COG0680 Ni,Fe-hydrogenase maturation factor.
    
 
 0.791
napG
Quinol dehydrogenase periplasmic component; COG1145 Ferredoxin.
  
 
 0.740
C662_09965
Radical SAM protein; COG0535 Predicted Fe-S oxidoreductases.
 
    0.724
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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