Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C662_11368COG2025 Electron transfer flavoprotein, alpha subunit. (309 aa)    
Predicted Functional Partners:
C662_11363
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
C662_03553
COG2086 Electron transfer flavoprotein, beta subunit.
 0.997
C662_03523
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.992
C662_07079
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.992
C662_19506
COG0644 Dehydrogenases (flavoproteins).
 
 0.992
C662_19540
Electron transfer flavoprotein-ubiquinone oxidoreductase; COG0644 Dehydrogenases (flavoproteins).
 
 0.991
C662_08025
NADH:flavin oxidoreductase/NADH oxidase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.955
C662_14481
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 
 0.944
C662_05550
COG1960 Acyl-CoA dehydrogenases.
 0.925
C662_15753
COG1960 Acyl-CoA dehydrogenases.
 0.914
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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