STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompRCOG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (253 aa)    
Predicted Functional Partners:
C662_11403
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.997
C662_08699
Putative sensor-regulator protein; COG0642 Signal transduction histidine kinase.
 
0.990
C662_18918
COG0642 Signal transduction histidine kinase.
 
0.989
C662_11735
Hpt domain-containing protein; COG2198 FOG: HPt domain.
  
 0.983
C662_09800
COG0642 Signal transduction histidine kinase.
 
0.980
C662_12442
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.953
C662_19305
PAS domain-containing protein/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.953
C662_01465
Putative signaling protein; COG2203 FOG: GAF domain.
  
 0.911
C662_12042
PAS domain-containing protein/PAC sensor-containing diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
 0.909
C662_17248
COG0642 Signal transduction histidine kinase.
 
0.908
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.