STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_12792Hypothetical protein. (150 aa)    
Predicted Functional Partners:
C662_12787
General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD.
  
 
 0.967
C662_10446
Type II and III secretion system protein; COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.
  
 
 0.946
C662_12747
General secretion pathway protein L.
     
 0.631
C662_12752
General secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
  
  
 0.588
C662_12757
COG4795 Type II secretory pathway, component PulJ.
  
  
 0.588
C662_12777
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
  
  
 0.567
C662_12772
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
  
  
 0.550
C662_12782
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  
 0.526
C662_12742
Hypothetical protein.
     
 0.511
C662_12762
General secretion pathway protein I; COG2165 Type II secretory pathway, pseudopilin PulG.
  
  
 0.503
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.