STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C662_13771COG1131 ABC-type multidrug transport system, ATPase component. (329 aa)    
Predicted Functional Partners:
C662_13766
COG0842 ABC-type multidrug transport system, permease component.
 
 0.974
C662_15321
COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.926
C662_10486
COG0842 ABC-type multidrug transport system, permease component.
 
 0.902
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.672
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.652
C662_15311
Periplasmic copper-binding protein; COG3420 Nitrous oxidase accessory protein.
 
 
 0.645
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.620
cysN
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.620
C662_15296
COG4263 Nitrous oxide reductase.
  
 
 0.620
C662_19610
COG2895 GTPases - Sulfate adenylate transferase subunit 1.
     
 0.620
Your Current Organism:
Thauera sp. 28
NCBI taxonomy Id: 303682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.