STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6SVE2Uncharacterized protein. (382 aa)    
Predicted Functional Partners:
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.638
A0A1V6T281
PseudoU_synth_1 domain-containing protein.
   
  
 0.630
A0A1V6TBS3
Uncharacterized protein.
   
  
 0.614
A0A1V6SZY6
Uncharacterized protein.
   
  
 0.597
A0A1V6T9I6
TPR_REGION domain-containing protein.
   
    0.489
A0A1V6T130
PseudoU_synth_1 domain-containing protein.
   
  
 0.473
A0A1V6TPT7
Uncharacterized protein.
   
  
 0.473
A0A1V6TLI0
TruB_N domain-containing protein.
   
  
 0.465
A0A1V6SU64
Uncharacterized protein.
   
  
 0.451
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.449
Your Current Organism:
Penicillium steckii
NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii
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