STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6SZ95GH16 domain-containing protein. (369 aa)    
Predicted Functional Partners:
A0A1V6SYF1
Phosphodiesterase.
    
 0.733
A0A1V6SQP1
Uncharacterized protein.
    
 0.692
A0A1V6T633
PH domain-containing protein.
    
 0.610
A0A1V6TL31
ANK_REP_REGION domain-containing protein.
    
 0.593
A0A1V6TLY6
ANK_REP_REGION domain-containing protein.
    
 0.593
A0A1V6TIC4
Uncharacterized protein.
    
  0.591
A0A1V6SXA6
CBM1 domain-containing protein.
    
 
 0.568
A0A1V6TEC5
Uncharacterized protein.
    
 0.567
A0A1V6T0J6
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
  0.544
A0A1V6TDX9
Uncharacterized protein.
    
  0.544
Your Current Organism:
Penicillium steckii
NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii
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