STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6TIB0Uncharacterized protein. (988 aa)    
Predicted Functional Partners:
A0A1V6U099
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.969
A0A1V6SX81
BP28CT domain-containing protein.
   
 
 0.964
A0A1V6TGN5
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.959
A0A1V6THE3
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.957
A0A1V6TGZ2
Utp12 domain-containing protein.
  
 
 0.918
A0A1V6TQB6
Uncharacterized protein.
  
  
 0.915
A0A1V6TLT5
ATP-dependent RNA helicase DBP10.
   
  0.914
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.905
A0A1V6TRY8
WD_REPEATS_REGION domain-containing protein.
   
 
 0.902
A0A1V6SZW3
WD_REPEATS_REGION domain-containing protein.
   
  
 0.898
Your Current Organism:
Penicillium steckii
NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii
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