STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6TLR4Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
A0A1V6SZI4
Uncharacterized protein.
    
 0.780
A0A1V6TR42
NTF2 domain-containing protein.
    
 0.736
A0A1V6SYV3
MPN domain-containing protein.
    
 0.729
A0A1V6TBQ0
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.695
A0A1V6TQ30
Uncharacterized protein.
    
  0.695
A0A1V6T0N9
ERCC4 domain-containing protein.
   
 0.682
A0A1V6SYC8
dUTPase domain-containing protein.
   
 0.650
A0A1V6TZH6
Uncharacterized protein.
   
 0.650
A0A1V6T1U8
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.648
A0A1V6TNB8
RPA_C domain-containing protein.
    
 0.621
Your Current Organism:
Penicillium steckii
NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii
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