A0A1V6TM34 protein (Penicillium steckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6TM34

Uncharacterized protein. (825 aa)

Predicted Functional Partners:

A0A1V6SRQ8

0.933

A0A1V6TFI0

0.909

A0A1V6U1C2

0.854

A0A1V6TDQ0

0.849

RPS1

0.846

A0A1V6TV67

0.840

A0A1V6TF03

0.839

A0A1V6SK26

0.838

A0A1V6TPN5

0.835

A0A1V6U0E5

0.818

Your Current Organism:

Penicillium steckii

NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6SK26	A0A1V6TDQ0	A0A1V6SK26	A0A1V6TDQ0	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	S10_plectin domain-containing protein.	0.999
A0A1V6SK26	A0A1V6TF03	A0A1V6SK26	A0A1V6TF03	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.999
A0A1V6SK26	A0A1V6TM34	A0A1V6SK26	A0A1V6TM34	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.838
A0A1V6SK26	A0A1V6TPN5	A0A1V6SK26	A0A1V6TPN5	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	TYR_PHOSPHATASE_2 domain-containing protein.	0.999
A0A1V6SK26	A0A1V6TV67	A0A1V6SK26	A0A1V6TV67	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Ribosomal_S10 domain-containing protein.	0.999
A0A1V6SK26	A0A1V6U0E5	A0A1V6SK26	A0A1V6U0E5	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A1V6SK26	A0A1V6U1C2	A0A1V6SK26	A0A1V6U1C2	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A1V6SK26	RPS1	A0A1V6SK26	A0A1V6U000	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
A0A1V6SRQ8	A0A1V6TM34	A0A1V6SRQ8	A0A1V6TM34	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.933
A0A1V6TDQ0	A0A1V6SK26	A0A1V6TDQ0	A0A1V6SK26	S10_plectin domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
A0A1V6TDQ0	A0A1V6TF03	A0A1V6TDQ0	A0A1V6TF03	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6TDQ0	A0A1V6TM34	A0A1V6TDQ0	A0A1V6TM34	S10_plectin domain-containing protein.	Uncharacterized protein.	0.849
A0A1V6TDQ0	A0A1V6TPN5	A0A1V6TDQ0	A0A1V6TPN5	S10_plectin domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.999
A0A1V6TDQ0	A0A1V6TV67	A0A1V6TDQ0	A0A1V6TV67	S10_plectin domain-containing protein.	Ribosomal_S10 domain-containing protein.	0.999
A0A1V6TDQ0	A0A1V6U0E5	A0A1V6TDQ0	A0A1V6U0E5	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A1V6TDQ0	A0A1V6U1C2	A0A1V6TDQ0	A0A1V6U1C2	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A1V6TDQ0	RPS1	A0A1V6TDQ0	A0A1V6U000	S10_plectin domain-containing protein.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
A0A1V6TF03	A0A1V6SK26	A0A1V6TF03	A0A1V6SK26	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
A0A1V6TF03	A0A1V6TDQ0	A0A1V6TF03	A0A1V6TDQ0	Uncharacterized protein.	S10_plectin domain-containing protein.	0.999
A0A1V6TF03	A0A1V6TM34	A0A1V6TF03	A0A1V6TM34	Uncharacterized protein.	Uncharacterized protein.	0.839