A0A1V6TYT3 protein (Penicillium steckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6TYT3

Uncharacterized protein; Belongs to the purine-cytosine permease (2.A.39) family. (525 aa)

Predicted Functional Partners:

A0A1V6T062

0.768

A0A1V6SPE4

0.566

A0A1V6TKC0

0.566

A0A1V6TL82

0.566

A0A1V6SSL3

0.562

A0A1V6SNG1

0.530

A0A1V6TR52

0.529

A0A1V6SQ94

0.525

A0A1V6T662

0.523

A0A1V6TUU6

0.520

Your Current Organism:

Penicillium steckii

NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6SNG1	A0A1V6SPE4	HATPase_c domain-containing protein.	Protein kinase domain-containing protein.	0.631
A0A1V6SNG1	A0A1V6SSL3	HATPase_c domain-containing protein.	Uncharacterized protein.	0.575
A0A1V6SNG1	A0A1V6T062	HATPase_c domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.431
A0A1V6SNG1	A0A1V6TKC0	HATPase_c domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.675
A0A1V6SNG1	A0A1V6TL82	HATPase_c domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.675
A0A1V6SNG1	A0A1V6TYT3	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the purine-cytosine permease (2.A.39) family.	0.530
A0A1V6SPE4	A0A1V6SNG1	Protein kinase domain-containing protein.	HATPase_c domain-containing protein.	0.631
A0A1V6SPE4	A0A1V6SSL3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.518
A0A1V6SPE4	A0A1V6TKC0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.853
A0A1V6SPE4	A0A1V6TL82	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.854
A0A1V6SPE4	A0A1V6TYT3	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the purine-cytosine permease (2.A.39) family.	0.566
A0A1V6SQ94	A0A1V6T662	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.606
A0A1V6SQ94	A0A1V6TR52	Uncharacterized protein.	AAA domain-containing protein.	0.606
A0A1V6SQ94	A0A1V6TUU6	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.606
A0A1V6SQ94	A0A1V6TYT3	Uncharacterized protein.	Uncharacterized protein; Belongs to the purine-cytosine permease (2.A.39) family.	0.525
A0A1V6SSL3	A0A1V6SNG1	Uncharacterized protein.	HATPase_c domain-containing protein.	0.575
A0A1V6SSL3	A0A1V6SPE4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.518
A0A1V6SSL3	A0A1V6T062	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.681
A0A1V6SSL3	A0A1V6TKC0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.518
A0A1V6SSL3	A0A1V6TL82	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.518