A0A1V6U0G8 protein (Penicillium steckii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6U0G8

Uncharacterized protein. (336 aa)

Predicted Functional Partners:

A0A1V6T4Z0

0.821

A0A1V6U0G2

0.821

A0A1V6TMJ5

0.768

A0A1V6TJU2

0.688

A0A1V6TZ93

0.682

A0A1V6SRV1

0.649

A0A1V6TM98

0.627

A0A1V6SLG6

0.587

A0A1V6TEE9

0.587

A0A1V6SKN7

0.583

Your Current Organism:

Penicillium steckii

NCBI taxonomy Id: 303698
Other names: CBS 260.55, P. steckii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6SKN7	A0A1V6SRV1	Uncharacterized protein.	MaoC-like domain-containing protein.	0.600
A0A1V6SKN7	A0A1V6T4Z0	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.793
A0A1V6SKN7	A0A1V6U0G2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.793
A0A1V6SKN7	A0A1V6U0G8	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A1V6SLG6	A0A1V6U0G8	FBPase domain-containing protein.	Uncharacterized protein.	0.587
A0A1V6SRV1	A0A1V6SKN7	MaoC-like domain-containing protein.	Uncharacterized protein.	0.600
A0A1V6SRV1	A0A1V6T4Z0	MaoC-like domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.969
A0A1V6SRV1	A0A1V6TJU2	MaoC-like domain-containing protein.	SH3 domain-containing protein.	0.720
A0A1V6SRV1	A0A1V6TM98	MaoC-like domain-containing protein.	RING-type domain-containing protein.	0.660
A0A1V6SRV1	A0A1V6TMJ5	MaoC-like domain-containing protein.	TPR_REGION domain-containing protein.	0.890
A0A1V6SRV1	A0A1V6TZ93	MaoC-like domain-containing protein.	RING-type domain-containing protein.	0.531
A0A1V6SRV1	A0A1V6U0G2	MaoC-like domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.969
A0A1V6SRV1	A0A1V6U0G8	MaoC-like domain-containing protein.	Uncharacterized protein.	0.649
A0A1V6T4Z0	A0A1V6SKN7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.793
A0A1V6T4Z0	A0A1V6SRV1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	MaoC-like domain-containing protein.	0.969
A0A1V6T4Z0	A0A1V6TJU2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	SH3 domain-containing protein.	0.986
A0A1V6T4Z0	A0A1V6TM98	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	RING-type domain-containing protein.	0.979
A0A1V6T4Z0	A0A1V6TMJ5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	TPR_REGION domain-containing protein.	0.999
A0A1V6T4Z0	A0A1V6TZ93	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	RING-type domain-containing protein.	0.978
A0A1V6T4Z0	A0A1V6U0G2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.978