STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_05257Beta-catenin-like 1. (564 aa)    
Predicted Functional Partners:
N306_00128
Spliceosome-associated protein CWC15.
    
 0.996
N306_06344
Cell division cycle 5-like.
   
 0.995
N306_02797
Pleiotropic regulator 1.
   
 0.990
N306_10700
Pre-mRNA-splicing factor SPF27.
   
 0.976
N306_04280
WW domain-binding protein 11.
    
  0.929
N306_06390
Protein BUD31.
   
 
 0.889
N306_00218
SNW domain-containing protein 1.
   
 
 0.875
N306_14490
Crooked neck-like 1.
   
 
 0.831
N306_01048
Splicing factor 3A subunit 2.
   
   0.823
N306_00478
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.773
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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