STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_03920Sorting nexin-3. (109 aa)    
Predicted Functional Partners:
N306_02721
Vacuolar protein sorting-associated protein 35.
   
 0.958
N306_10327
Vacuolar protein sorting-associated protein 26B.
   
 0.888
N306_03466
Vacuolar protein sorting-associated protein 26A.
    
 0.877
N306_11610
Ribosomal protein S6 kinase delta-1.
     
 0.855
N306_14639
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.826
N306_08698
Sorting nexin-12.
  
  
 
0.761
N306_13109
Protein wntless.
    
 0.725
N306_05119
Ubiquitin carboxyl-terminal hydrolase 10.
    
 0.674
N306_04492
Sorting nexin-13.
     
 0.575
N306_08832
Sorting nexin-27.
    
 
 0.506
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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