STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_14779Ubiquitin carboxyl-terminal hydrolase. (906 aa)    
Predicted Functional Partners:
N306_13974
Beta-1 adrenergic receptor.
    
 0.708
N306_07258
Centriolar coiled-coil protein of 110 kDa.
    
 0.665
N306_09604
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.652
N306_02458
Histone H2A deubiquitinase MYSM1.
   
 
 0.637
N306_14708
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.630
N306_11993
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.626
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
 0.624
N306_07691
Replication factor C subunit 5.
    
 0.623
N306_07501
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.622
N306_12067
Ubiquitin-40S ribosomal protein S27a.
    
  0.619
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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