STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_00153Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)    
Predicted Functional Partners:
N306_01064
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.988
N306_10432
Protein transport protein Sec24A.
   
0.986
N306_01029
Protein transport protein Sec31A.
   
 0.985
N306_10554
Protein transport protein Sec24C.
   
0.966
N306_04427
Protein transport protein Sec24D.
   
0.963
N306_01422
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.915
N306_05062
60S ribosomal protein L12.
 
      0.899
N306_10433
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.893
N306_09389
GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.893
N306_12378
Ankyrin repeat domain-containing protein 40.
   
 0.879
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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