STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_02205E3 ubiquitin-protein ligase RNF213. (145 aa)    
Predicted Functional Partners:
N306_02686
E3 ubiquitin-protein ligase RNF213.
 
 
  0.637
N306_02688
E3 ubiquitin-protein ligase RNF213.
  
 
  0.566
N306_14068
Complement C1q subcomponent subunit C.
    
  0.505
N306_11313
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.461
N306_04355
Leucine-rich repeat-containing G-protein coupled receptor 5.
    
 0.459
N306_08567
Leucine-rich repeat-containing G-protein coupled receptor 4.
    
 0.459
N306_02776
Relaxin receptor 1.
    
 0.459
N306_14618
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
  0.457
N306_02723
Transcription initiation factor TFIID subunit 12.
    
  0.457
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
 0.451
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.