N306_10273 protein (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N306_10273

StAR-related lipid transfer protein 5. (117 aa)

Predicted Functional Partners:

N306_01706

0.699

N306_08994

0.699

N306_08666

0.699

N306_11870

0.520

N306_04941

0.509

N306_04301

0.495

N306_03936

0.489

N306_12363

0.486

N306_05621

0.463

N306_09103

0.430

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_01706	N306_03936	A0A091W4W0	A0A091VI31	Vesicle-associated membrane protein-associated protein B.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.699
N306_01706	N306_04301	A0A091W4W0	A0A091W645	Vesicle-associated membrane protein-associated protein B.	StAR-related lipid transfer protein 3.	0.959
N306_01706	N306_04941	A0A091W4W0	A0A091W949	Vesicle-associated membrane protein-associated protein B.	Collagen type IV alpha-3-binding protein.	0.630
N306_01706	N306_08994	A0A091W4W0	A0A091WEP8	Vesicle-associated membrane protein-associated protein B.	Vesicle-associated membrane protein-associated protein A.	0.945
N306_01706	N306_10273	A0A091W4W0	A0A091VCQ9	Vesicle-associated membrane protein-associated protein B.	StAR-related lipid transfer protein 5.	0.699
N306_03936	N306_01706	A0A091VI31	A0A091W4W0	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Vesicle-associated membrane protein-associated protein B.	0.699
N306_03936	N306_04301	A0A091VI31	A0A091W645	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	StAR-related lipid transfer protein 3.	0.977
N306_03936	N306_04941	A0A091VI31	A0A091W949	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Collagen type IV alpha-3-binding protein.	0.510
N306_03936	N306_08666	A0A091VI31	A0A091WKD4	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Motile sperm domain-containing protein 1.	0.699
N306_03936	N306_08994	A0A091VI31	A0A091WEP8	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Vesicle-associated membrane protein-associated protein A.	0.703
N306_03936	N306_09103	A0A091VI31	A0A091WQT5	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	2Fe-2S ferredoxin-type domain-containing protein.	0.747
N306_03936	N306_10273	A0A091VI31	A0A091VCQ9	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	StAR-related lipid transfer protein 5.	0.489
N306_03936	N306_11870	A0A091VI31	A0A091VGM4	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	PCTP-like.	0.516
N306_04301	N306_01706	A0A091W645	A0A091W4W0	StAR-related lipid transfer protein 3.	Vesicle-associated membrane protein-associated protein B.	0.959
N306_04301	N306_03936	A0A091W645	A0A091VI31	StAR-related lipid transfer protein 3.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.977
N306_04301	N306_04941	A0A091W645	A0A091W949	StAR-related lipid transfer protein 3.	Collagen type IV alpha-3-binding protein.	0.514
N306_04301	N306_08666	A0A091W645	A0A091WKD4	StAR-related lipid transfer protein 3.	Motile sperm domain-containing protein 1.	0.719
N306_04301	N306_08994	A0A091W645	A0A091WEP8	StAR-related lipid transfer protein 3.	Vesicle-associated membrane protein-associated protein A.	0.982
N306_04301	N306_09103	A0A091W645	A0A091WQT5	StAR-related lipid transfer protein 3.	2Fe-2S ferredoxin-type domain-containing protein.	0.430
N306_04301	N306_10273	A0A091W645	A0A091VCQ9	StAR-related lipid transfer protein 3.	StAR-related lipid transfer protein 5.	0.495