STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10644Tripartite motif-containing protein 45. (419 aa)    
Predicted Functional Partners:
N306_10645
V-set domain-containing T-cell activation inhibitor 1.
 
   
  0.794
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
  0.630
N306_14459
60S ribosomal protein L35.
    
 
 0.513
N306_10170
Inducible T-cell costimulator.
    
  0.513
N306_14923
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.501
N306_01372
2-5A-dependent ribonuclease.
    
 0.484
N306_12067
Ubiquitin-40S ribosomal protein S27a.
    
  0.478
N306_11313
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.475
N306_06769
Protein argonaute-3.
    
 0.468
N306_07135
Protein argonaute-4.
    
 0.468
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.