STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10437S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)    
Predicted Functional Partners:
N306_14569
F-box/WD repeat-containing protein 1A.
    
 0.999
N306_14090
Cullin-3; Belongs to the cullin family.
   
 0.999
N306_07370
RING-box protein 1.
   
 0.999
N306_02374
Lysine-specific demethylase 2A.
   
 0.999
N306_15456
S-phase kinase-associated protein 2.
    
 0.999
N306_02047
Lysine-specific demethylase 2B.
   
 0.999
N306_11858
F-box/WD repeat-containing protein 11.
    
 0.994
N306_15267
F-box only protein 22.
    
 0.993
N306_13315
F-box/LRR-repeat protein 5.
    
 0.991
N306_09541
F-box/LRR-repeat protein 3.
   
 0.991
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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