STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_11413Programmed cell death protein 6. (40 aa)    
Predicted Functional Partners:
N306_01029
Protein transport protein Sec31A.
    
 
 0.774
N306_03532
Calpastatin.
    
 0.765
N306_09341
Programmed cell death 6-interacting protein.
    
 
 0.743
N306_06793
Heme-binding protein 2.
    
   0.672
N306_07092
Calpain-5; Belongs to the peptidase C2 family.
   
 0.605
N306_10008
Calpain-5; Belongs to the peptidase C2 family.
   
 0.605
N306_03984
Calpain-10; Belongs to the peptidase C2 family.
   
 0.605
N306_10814
Androglobin.
   
 0.605
N306_10815
Androglobin.
   
 0.605
N306_05735
Calpain-14; Belongs to the peptidase C2 family.
   
 0.605
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.