STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_14102Phenylalanine--tRNA ligase beta subunit. (569 aa)    
Predicted Functional Partners:
N306_15115
Uncharacterized protein.
  
 0.997
N306_01921
Ferredoxin-fold anticodon-binding domain-containing protein 1.
  
 0.996
N306_13335
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.987
N306_11589
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.978
N306_10530
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.968
N306_10160
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.925
N306_13211
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.918
N306_01378
Transmembrane and coiled-coil domains protein 1.
 
      0.899
N306_11587
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.896
N306_01098
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.885
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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