STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_01921Ferredoxin-fold anticodon-binding domain-containing protein 1. (569 aa)    
Predicted Functional Partners:
N306_14102
Phenylalanine--tRNA ligase beta subunit.
  
 0.996
N306_12854
Adipocyte plasma membrane-associated protein.
  
  
 0.902
N306_03666
S1 motif domain-containing protein.
  
  
 0.902
N306_13335
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.898
N306_03654
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.887
N306_11589
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.829
N306_13763
Ribosomal_S7 domain-containing protein.
  
  
 0.769
N306_11863
Nucleotide exchange factor SIL1.
  
 0.757
N306_12529
60S acidic ribosomal protein P0.
   
  
 0.680
N306_07266
THUMP domain-containing protein 1.
  
 
 0.659
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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