STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_07068Malignant T-cell-amplified sequence 1. (178 aa)    
Predicted Functional Partners:
N306_06548
Density-regulated protein; Belongs to the DENR family.
   
 
 0.993
N306_04046
Obg-like ATPase 1.
 
 
  
 0.907
N306_11434
Eukaryotic translation initiation factor 1b.
   
 
 0.902
N306_05359
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.672
N306_06069
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.670
N306_02817
40S ribosomal protein S3a.
    
   0.664
N306_01098
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.663
N306_12414
40S ribosomal protein S20.
   
   0.662
N306_09644
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.657
N306_01815
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
   0.652
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.