N306_01180 protein (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N306_01180

Leucine-rich repeat and IQ domain-containing protein 1. (230 aa)

Predicted Functional Partners:

N306_01181

0.927

N306_03056

0.827

N306_12875

0.827

N306_14644

0.717

N306_02386

0.717

N306_11066

0.714

N306_09171

0.664

N306_11313

0.603

N306_14190

0.584

N306_00328

0.576

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00328	N306_01180	A0A091VBN6	A0A091VLW3	Mitogen-activated protein kinase kinase kinase 2.	Leucine-rich repeat and IQ domain-containing protein 1.	0.576
N306_00328	N306_01181	A0A091VBN6	A0A091VPK5	Mitogen-activated protein kinase kinase kinase 2.	Leucine-rich repeat and IQ domain-containing protein 1.	0.576
N306_00328	N306_11313	A0A091VBN6	A0A091WF73	Mitogen-activated protein kinase kinase kinase 2.	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.876
N306_01180	N306_00328	A0A091VLW3	A0A091VBN6	Leucine-rich repeat and IQ domain-containing protein 1.	Mitogen-activated protein kinase kinase kinase 2.	0.576
N306_01180	N306_01181	A0A091VLW3	A0A091VPK5	Leucine-rich repeat and IQ domain-containing protein 1.	Leucine-rich repeat and IQ domain-containing protein 1.	0.927
N306_01180	N306_02386	A0A091VLW3	A0A091WYQ3	Leucine-rich repeat and IQ domain-containing protein 1.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.717
N306_01180	N306_03056	A0A091VLW3	A0A091VKJ3	Leucine-rich repeat and IQ domain-containing protein 1.	Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.	0.827
N306_01180	N306_09171	A0A091VLW3	A0A091X4P4	Leucine-rich repeat and IQ domain-containing protein 1.	Peripheral plasma membrane protein CASK.	0.664
N306_01180	N306_11066	A0A091VLW3	A0A091VR77	Leucine-rich repeat and IQ domain-containing protein 1.	Netrin-G1.	0.714
N306_01180	N306_11313	A0A091VLW3	A0A091WF73	Leucine-rich repeat and IQ domain-containing protein 1.	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.603
N306_01180	N306_12875	A0A091VLW3	A0A091WPB5	Leucine-rich repeat and IQ domain-containing protein 1.	Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.	0.827
N306_01180	N306_14190	A0A091VLW3	A0A091WER2	Leucine-rich repeat and IQ domain-containing protein 1.	Mitogen-activated protein kinase kinase kinase 19.	0.584
N306_01180	N306_14644	A0A091VLW3	A0A091WMU3	Leucine-rich repeat and IQ domain-containing protein 1.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.717
N306_01181	N306_00328	A0A091VPK5	A0A091VBN6	Leucine-rich repeat and IQ domain-containing protein 1.	Mitogen-activated protein kinase kinase kinase 2.	0.576
N306_01181	N306_01180	A0A091VPK5	A0A091VLW3	Leucine-rich repeat and IQ domain-containing protein 1.	Leucine-rich repeat and IQ domain-containing protein 1.	0.927
N306_01181	N306_02386	A0A091VPK5	A0A091WYQ3	Leucine-rich repeat and IQ domain-containing protein 1.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.717
N306_01181	N306_03056	A0A091VPK5	A0A091VKJ3	Leucine-rich repeat and IQ domain-containing protein 1.	Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.	0.827
N306_01181	N306_09171	A0A091VPK5	A0A091X4P4	Leucine-rich repeat and IQ domain-containing protein 1.	Peripheral plasma membrane protein CASK.	0.664
N306_01181	N306_11066	A0A091VPK5	A0A091VR77	Leucine-rich repeat and IQ domain-containing protein 1.	Netrin-G1.	0.714
N306_01181	N306_11313	A0A091VPK5	A0A091WF73	Leucine-rich repeat and IQ domain-containing protein 1.	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.603