STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_00737Ubiquitin-protein ligase E3C. (1061 aa)    
Predicted Functional Partners:
N306_07975
E3 ubiquitin-protein ligase TRIP12.
   
 
0.825
N306_13656
Ubiquitin-protein ligase E3B.
   
 
0.821
N306_04109
26S proteasome non-ATPase regulatory subunit 14.
    
 
 0.717
N306_08534
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.684
N306_03541
26S proteasome non-ATPase regulatory subunit 2.
    
 
 0.632
N306_01566
Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.614
N306_09373
Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.614
N306_02888
Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.614
N306_02458
Histone H2A deubiquitinase MYSM1.
    
 
 0.609
N306_11785
Mitogen-activated protein kinase kinase kinase 7.
   
   0.598
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.