STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10008Calpain-5; Belongs to the peptidase C2 family. (641 aa)    
Predicted Functional Partners:
N306_03532
Calpastatin.
    
 0.763
N306_12620
Sorcin.
 
 
 0.606
N306_11413
Programmed cell death protein 6.
   
 0.605
N306_00821
Programmed cell death protein 6.
   
 0.605
N306_08328
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.594
N306_01882
Caspase-1; Belongs to the peptidase C14A family.
    
 0.480
N306_01883
Caspase-1; Belongs to the peptidase C14A family.
    
 0.480
N306_10279
Mesoderm development candidate 1.
    
 0.469
N306_15244
Talin-2.
    
 0.469
N306_14678
BH3-interacting domain death agonist.
    
  0.452
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.