STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_10017Protein EMSY. (1289 aa)    
Predicted Functional Partners:
N306_10502
PHD finger protein 12.
   
 
 0.814
N306_12493
Chromobox protein 1.
    
 
 0.781
N306_00352
Mortality factor 4-like 1.
   
 
 0.764
N306_11028
Lysine-specific demethylase 5A.
   
 
 0.762
N306_00581
Paired amphipathic helix protein Sin3b.
    
 
 0.722
N306_10894
Paired amphipathic helix protein Sin3a.
    
 
 0.722
N306_13023
Chromobox protein 3.
    
 
 0.695
N306_06593
GATA zinc finger domain-containing protein 1.
    
 
 0.685
N306_09112
M-phase phosphoprotein 8.
    
 
 0.643
N306_03943
AT-rich interactive domain-containing protein 4A.
   
 
 0.641
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.