STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_12075Sedoheptulokinase. (468 aa)    
Predicted Functional Partners:
N306_07335
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.895
N306_07176
26S proteasome non-ATPase regulatory subunit 6.
   
 0.834
N306_11129
26S proteasome non-ATPase regulatory subunit 11.
   
 0.828
N306_08612
26S proteasome non-ATPase regulatory subunit 12.
   
 0.828
N306_03541
26S proteasome non-ATPase regulatory subunit 2.
   
 0.827
N306_03835
Proteasome endopeptidase complex.
   
 0.816
N306_03965
26S proteasome non-ATPase regulatory subunit 1.
   
 0.811
N306_01735
Proteasomal ubiquitin receptor ADRM1.
   
 0.808
N306_12077
Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family.
 
    
 0.783
N306_03579
Ubiquitin-like domain-containing CTD phosphatase 1.
   
 0.763
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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