STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06249Myomesin-3. (1423 aa)    
Predicted Functional Partners:
N306_11969
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.610
N306_08631
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
    
 0.564
N306_11313
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.557
N306_00826
Testis-expressed sequence 10 protein.
    
 0.552
N306_13969
Hyaluronan-binding protein 2.
    
 0.532
N306_14321
Hepatocyte growth factor activator.
    
 0.532
N306_08894
60S ribosomal protein L30.
    
  0.518
N306_12595
Vimentin; Belongs to the intermediate filament family.
    
  0.506
N306_00574
Calreticulin.
    
 0.499
N306_12742
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.491
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.