STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06852E3 ubiquitin-protein ligase TRIM36. (712 aa)    
Predicted Functional Partners:
N306_03660
Ubiquitin-40S ribosomal protein S27a.
    
  0.531
N306_01372
2-5A-dependent ribonuclease.
    
 0.484
N306_11313
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.475
N306_05958
PH domain leucine-rich repeat-containing protein phosphatase 2.
    
 0.467
N306_05138
P53-induced protein with a death domain.
    
  0.467
N306_00845
Microtubule-associated protein RP/EB family member 2.
    
 0.452
N306_02750
Ubiquilin-4.
    
  0.448
N306_13547
Ubiquilin-1.
    
  0.448
N306_08973
UV excision repair protein RAD23 B.
    
  0.448
N306_10170
Inducible T-cell costimulator.
    
  0.448
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.