STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_09201Cystathionine beta-synthase. (97 aa)    
Predicted Functional Partners:
N306_15229
Cystathionine gamma-lyase.
 
 0.960
N306_09202
Cystathionine beta-synthase.
 
   
  0.956
N306_11589
Bifunctional glutamate/proline--tRNA ligase.
  
 0.891
N306_09200
Cystathionine beta-synthase.
 
      0.847
N306_12782
Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3.
    
 0.798
N306_00899
Sulfurtransferase.
  
 
 0.776
N306_12252
Aminotran_5 domain-containing protein.
  
 
 0.766
N306_14578
Ketimine reductase mu-crystallin.
  
 
 0.758
N306_08750
Glutamate--cysteine ligase catalytic subunit.
   
 0.739
N306_05106
Methionine synthase reductase.
  
 
 0.736
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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