STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06482tRNA (Uracil-5-)-methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (582 aa)    
Predicted Functional Partners:
N306_06384
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
  
 0.739
N306_09831
Transducin beta-like 3.
   
    0.713
N306_11304
Ribosome production factor 2.
   
  
 0.635
N306_08426
N-acetyltransferase 10.
  
    0.612
N306_05585
tRNA-splicing endonuclease subunit Sen54.
   
    0.608
N306_12371
U3 small nucleolar RNA-associated protein 18.
   
    0.597
N306_10635
WD repeat-containing protein 3.
   
    0.578
N306_01603
Guanine nucleotide-binding protein-like 3.
   
  
 0.573
N306_10052
Nucleolar complex protein 2.
   
    0.570
N306_08637
U3 small nucleolar RNA-associated protein 6.
   
    0.567
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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