STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_11769Lysine-specific histone demethylase 1A. (736 aa)    
Predicted Functional Partners:
N306_04651
REST corepressor 1.
    
 0.998
N306_03943
AT-rich interactive domain-containing protein 4A.
   
 
 0.978
N306_14634
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
 
   
  0.965
N306_11629
REST corepressor 3.
    
 0.959
N306_08045
PHD finger protein 21A.
    
 0.949
N306_07242
Putative oxidoreductase GLYR1.
    
 
 0.948
N306_08008
Histone H3.2.
    
 0.918
N306_01579
Androgen receptor.
    
 0.876
N306_11712
Chromodomain-helicase-DNA-binding protein 4.
   
 0.864
N306_05560
Histone deacetylase 1.
   
 0.863
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.